Methods for Controlling Flower Development in Plants

ABSTRACT

The present invention provides a method of controlling the sexuality of a plant comprising treating the plant with a composition comprising a compound selected from the group consisting of jasmonic acid, a jasmonic acid derivative, and a salt thereof.

CROSS-REFERENCE TO RELATED APPLICATION

This application is a continuation of, and claims priority to, U.S.patent application Ser. No. 13/142,819, filed Sep. 26, 2011, now issuedas U.S. Pat. No. 9,258,998, which is a U.S. national phase applicationfiled under 35 U.S.C. §371 claiming priority to International PatentApplication No. PCT/US2010/020505, filed Jan. 8, 2010, which claimspriority under 35 U.S.C. §119(e) to U.S. Provisional Patent ApplicationNo. 61/143,394, filed Jan. 8, 2009, all of which applications are herebyincorporated herein by reference in their entireties.

BACKGROUND OF THE INVENTION

Most flowering plants produce perfect flowers containing both the maleorgans (stamens) and female organs (pistils). In maize, which hasphysically separated male and female inflorescences, floral meristemsbecome unisexual through sex determination (Dellaporta & Calderon-Urrea,1994, Science 266:1501; Irish, 1996, Bioessays 18:363). The basic unitof the maize inflorescence, called a spikelet, contains one upper andone lower flower (known as florets in grasses). Each floret initiates aseries of floral organs including three stamen primordia and a centralpistil primordium (Bonnet, 1940, J. Agric. Res. 60:25; Kiesselbach, “TheStructure and Reproduction of Corn,” Univ. of Nebraska Press, Lincoln,Nebr., 1949). These initially bisexual florets become exclusivelystaminate in the tassel (by abortion of pistil primordia) andexclusively pistillate in the ear (by arrest of developing stamens)(Bonnet, 1940, J. Agric. Res. 60:25; Cheng et al., 1983, Am. Bot.70:450). Each ear spikelet produces a solitary functional pistil in theupper floret due to abortion of the pistil in the lower floret (Bonnet,1940, J. Agric. Res. 60:25; Kiesselbach, “The Structure and Reproductionof Corn,” Univ. of Nebraska Press, Lincoln, Nebr., 1949; Cheng et al.,1983, Am. Bot. 70:450).

Mutations altering the sexual fate of florets in maize indicate that sexdetermination is under genetic control. The non-homeotic tasselseed (ts)mutations ts1 and ts2 result in the conversion of the tasselinflorescence from staminate to pistillate (Emerson, 1920, J. Hered.11:65; Nickerson & Dale, 1955, Ann. Mo. Bot. Gard. 42:195). Both ts1 andts2 are required to eliminate pistil primordia through cell death(Calderon-Urrea & Dellaporta, 1999, Development 126:435; Kim et al.,2007, Genetics 177:2547). The ts2 gene encodes a short-chaindehydrogenase/reductase (DeLong et al., 1993, Cell 74:757) with broadactivity, which has complicated the discovery of its natural substrate(Wu et al., 2007, FEBS J. 274:1172). It is unknown how ts genes mediatepistil cell death, although it has been suggested that thedehydrogenase/reductase activity of ts2 may produce a pro-apoptoticsignal or metabolize a substrate required for cell viability(Calderon-Urrea & Dellaporta, 1999, Development 126:435; Wu et al.,2007, FEBS J. 274:1172). Even less is known about the ts1 gene. TS2transcripts are low or undetectable in tsl mutant tassels, whichsuggests that ts1 may act upstream of ts2 by regulating ts2 RNA levelsand possibly other sex determination genes (Calderon-Urrea & Dellaporta,1999, Development 126:435).

Chemicals have been used to modulate and modify sexual differentiationin plants. The plant hormone ethylene has been observed to promotefeminization in cucumber (Yamasaki et al., 2005, Vitam. Horm. 72:79).Recent genetic and biochemical evidence has confirmed the role ofethylene in sex determination of melon, a related species (Boualem etal., 2008, Science 321:836). Conversely, gibberellin has masculinizingeffects in cucumber but promotes feminization in maize (Bensen et al.,1995, Plant Cell 7:75), and auxin also has opposing effects in cucumberand Mercurialis annua (Yamasaki et al., 2005, Vitam. Horm. 72:79).However, little is known at this point about the role that chemicalsplay in sexual development and maturation of plants.

There is thus a great interest in identifying chemical compounds thatmodulate sexual differentiation in plants. Such compounds would beuseful in suppressing or enhancing specific sexual phenotypes in plants,allowing the control of vast groups of plants without the need fortime-consuming mechanical manipulation of the plants. The presentinvention fulfills these needs.

BRIEF SUMMARY OF THE INVENTION

The invention includes an agriculturally compatible compositioncomprising an effective amount of a compound selected from the groupconsisting of jasmonic acid, a jasmonic acid derivative, and a saltthereof. In one aspect, the derivative is a jasmonic acid ester. Inanother aspect, the derivative is jasmonic acid methyl ester or methyljasmonate.

The invention also includes a method of modulating sexuality in a plant.The method comprises the step of administering to the plant anagriculturally compatible composition comprising an effective amount ofa compound selected from the group consisting of jasmonic acid, ajasmonic acid derivative, and a salt thereof.

The invention also includes a method of suppressing completefeminization or restoring male sexuality in a plant with a ts1 or ts2mutation. The method comprises the step of administering to the plant anagriculturally compatible composition comprising an effective amount ofa compound selected from the group consisting of jasmonic acid, ajasmonic acid derivative, and a salt thereof.

The invention also includes a method of creating homozygous stock in aplant with a ts1 or ts2 mutation. The method includes the step ofadministering to the plant an agriculturally compatible compositioncomprising an effective amount of a compound selected from the groupconsisting of jasmonic acid, a jasmonic acid derivative, and a saltthereof, wherein the progeny of the plant is homozygous for the mutationand is male-sterile.

In one aspect, the derivative is jasmonic acid methyl ester.

In one aspect, the plant is grass-related. In another aspect, the plantis maize or rice. In yet another aspect, the plant is maize.

In one aspect, the method of the invention further comprises the step ofadministering to the plant at least one additional compound useful forcontrolling plant sexuality. In another aspect, the at least oneadditional compound is selected from the group consisting of ethylene,gibberelin and auxin.

BRIEF DESCRIPTION OF THE DRAWINGS

For the purpose of illustrating the invention, there are depicted in thedrawings certain embodiments of the invention. However, the invention isnot limited to the precise arrangements and instrumentalities of theembodiments depicted in the drawings.

FIG. 1 is a series of images illustrating the genetic and physical mapof the ts1 locus in maize chromosome 2.

FIGS. 2A-2C are series of images illustrating the structure of the ts1gene and the ts1 mutant alleles. In FIG. 2A, hollow boxes at left andright are 5′ and 3′ untranslated regions (UTRs), respectively; darkenedboxes are exons and angled lines are introns. Mutations in eight ts1mutant alleles are positioned above the corresponding exons. Insertionsare represented by inverted triangles and a single deletion by atriangle. In FIG. 2B, TS1 protein features include a predictedchloroplast transit peptide (cTP, on the left), the PLAT/LH2 beta-barrel(in the middle), and the lipoxygenase domain (on the right) as well asfive conserved residues (H501, H583, H770, N774, I918) necessary foriron binding and the phenylalanine (F636) residue predicting 13-LOXregiospecificity. In FIG. 2C, Bayesian and maximum parsimony consensustree of predicted type 2 13-lipoxygenases in angiosperms is displayed.The arrowhead indicates the position of the maize ts1-encodedlipoxygenase. Posterior probabilities from Bayesian inference andbootstrap support from maximum parsimony analysis less than 100% aredisplayed below internal nodes to the left and right of a slash,respectively. This subclade is part of a more extensive phylogeneticanalysis shown in FIGS. 5A-5B.

FIG. 3 is an image of the Southern blot hybridization of a ts1 probe toKpnI-digested genomic DNA from inbred lines W22 and B73 and tsl mutantlines ts1-Mu92 and ts1-Mu01 along with plasmid DNA from BAC b0478F04.Both ts1 and ts1b are detected in the inbred lines and the mutantts1-Mu92, while only ts1b is present in the ts1 full-deletion mutantts1-Mu01.

FIGS. 4A-4C are a representation of the alignment of the TS1 and TS1bproteins to potato lipooxygenase H3 (StLOX5) and soybean L-1 (GmLOX1).StLOX5 is the closest TS1 relative that has been biochemicallycharacterized, while GmLOX1 is one of the best studied plantlipoxygenases. Sequences were aligned with ClustalW2 and the graysimilarity shading style in the background was applied with Jalview withthe BLOSUM62 color scheme. The ts1 CDS was predicted to encode a proteinof 918 amino acids with a theoretical mass of 103 kDa. Predicted domainsare shown surrounded by colored boxes: the chloroplast transit peptide(cTP, row 1), the PLAT/LH2 domain (rows 1-3) and the lipoxygenase domain(rows 3-10). The predicted cTP has different lengths in TS1, TS1b andStLOX5, while GmLOX1, a type 1 lipoxygenase, does not possess a cTP.Asterisks indicate the five conserved residues necessary for ironbinding. The black arrowhead marks the phenylalanine residue predicting13-LOX regiospecificity.

FIGS. 5A-5B are a representation of the phylogenetic analysis of TS1 andselected plant lipoxygenases by Bayesian and Maximum Parsimonyinference. Nearly identical tree topologies were generated by Bayesianand Maximum Parsimony (MP). When values are lower than 100%, posteriorprobabilities from Bayesian inference and bootstrap support from MPanalysis were displayed below internal nodes to the left and right of aslash sign, respectively. The fourth box from the top surrounds the type2 13-LOX clade, which includes ts1-encoded LOX (arrow). The clade groupslipoxygenases from both monocotyledons and dicotyledons. Severallipoxygenases from this clade have been experimentally shown to display13-LOX regiospecificity (second box from the top) and/or to localize tochloroplasts (fourth box from the top). The other clades in the treecontain type 1 lipoxygenases from: monocotyledons (third box from thetop) with 9-LOX, 13-LOX or mixed regiospecificity; dicotyledons with13-LOX regiospecificity (second box from the top); and dicotyledons with9-LOX regiospecificity (first box from the top).

FIGS. 6A-6I are series of images relating to expression of ts1, ts1b andts2 in maize. FIG. 6A illustrates the expression profile of ts1, ts1b,and ts2 in different maize tissues by quantitative RT-PCR on threebiological replicates for each tissue. Results were plotted as the ratioto the lowest detected level (ts1b in root)±SE. The y axis is inlogarithmic scale. FIGS. 6B to 6E illustrate RNA in situ hybridizationtargeting the 3′UTR of ts1 (dark purple) in developing inflorescences.Scale bars, 200 mm. FIGS. 6B and 6C illustrate wild-type heterozygotemale inflorescences (tassels) of 1.6 and 1.5 cm, respectively. FIG. 6Dillustrates wild-type female inflorescence (ear) of 1.5 cm. FIG. 6Eillustrates homozygous ts1-Mu01 deletion mutant tassel showing nohybridization signal. FIGS. 6F to 6I illustrate co-localization ofTS1:mCherry and bcSnt:GFP fusion proteins in plastids of transfectedonion epidermal cells. Scale bars, 50 mm. FIG. 6F illustratesTS1:mCherry red fluorescence (shown as gray color). FIG. 6G illustratesRbcSnt:GFP green fluorescence (shown as gray color). FIG. 6H illustratesthe merge of Ts1:mCherry and RbcSnt:GFP plus two additional channels:4′,6′-diamidino-2-phenylindole (blue fluorescence, shown as large greyspots) for distinguishing nuclei, and differential interference contrast(DIC) for displaying cellular morphology. FIG. 6I illustrates thescatterplot of pixel gray value frequencies for RbcSnt:GFP (x axis) andTs1:mCherry (y axis) channels. Frequencies were displayed using arainbow lookup table (bottom, units between 0 and 255). Region 3 (upperright) contains pixels with signal above background in both channels,and a linear correlation in this region is a qualitative indicator ofco-localization.

FIGS. 7A-7E illustrate the determination of linoleic acid oxidationproducts in maize. FIG. 7A illustrates the partial gas chromatography-MSchromatograms displaying linoleic acid oxidation products generated bycrude extracts of wild-type W22 tassels (light line) but not ts1-reftassels (dark line). HPLC analysis of oxidation products (inset)indicated that the lipid hydroperoxide (HOD) peak was a mixture of9-hydroxy-10,12-octadecadienoic acid (9-HOD) and13-hydroxy-9,11-octadecadienoic acid (13-HOD). FIG. 7B is a series ofbox plots summarizing the distribution of jasmonic acid in three tasselsets. Circles represent individual measurements. Diamonds show the 95%confidence interval of the mean (horizontal line). +/+ corresponds toinbred line W22. FIG. 7C illustrates the blank-treated mutant ts1tassel. FIG. 7D illustrates JA-treated ts1 tassel. FIG. 7E illustratesJA-treated ts2 tassel.

FIG. 8 illustrates the biosynthesis of jasmonic acid through theoctadecanoid pathway.

FIGS. 9A-9D illustrate additional phenotypes of JA-treated ts1 and ts2mutant tassels. FIG. 9A illustrates ts1 bisexual spikelets containedboth anthers (dark arrows) and pistils (light arrows) while glumesdisplay numerous trichomes and anthocyanins ring at the base. Anthersemerging from ts1 (FIG. 9B) and ts2 (FIG. 9C) rescued spikelets. FIG. 9Dillustrates blank-treated tsl spikelets with short, glabrous glumeswithout anthocyanin ring at base.

Definitions

As used herein, each of the following terms has the meaning associatedwith it in this section.

Unless defined otherwise, all technical and scientific terms used hereingenerally have the same meaning as commonly understood by one ofordinary skill in the art to which this invention belongs. Generally,the nomenclature used herein and the laboratory procedures in cellculture, molecular genetics, organic chemistry, and peptide chemistryare those well known and commonly employed in the art.

As used herein, the articles “a” and “an” refer to one or to more thanone (i.e. to at least one) of the grammatical object of the article. Byway of example, “an element” means one element or more than one element.

As used herein, the term “about” will be understood by persons ofordinary skill in the art and will vary to some extent on the context inwhich it is used.

As used herein, the term “jasmonic acid derivative” refers to aderivative of jasmonic acid, such as but not limited to, a jasmonic acidester. The class of jasmonic acid esters includes, but is not limitedto, a jasmonic acid alkyl ester, jasmonic acid aryl ester, jasmonic acidheteroaryl ester, jasmonic acid arylakyl ester, and jasmonic acidheteroaryl ester. The term “jasmonic acid derivative” also refers tochemical compounds that give rise to jasmonic acid or other jasmonicacid derivative by chemical or microorganism-based decomposition,regardless whether the decomposition takes place under controlledconditions or not.

As used herein, the term “polypeptide” refers to a polymer composed ofamino acid residues, related naturally occurring structural variants,and synthetic non-naturally occurring analogs thereof linked via peptidebonds. Synthetic polypeptides may be synthesized, for example, using anautomated polypeptide synthesizer. As used herein, the term “protein”typically refers to large polypeptides. As used herein, the term“peptide” typically refers to short polypeptides. Conventional notationis used herein to represent polypeptide sequences: the left-hand end ofa polypeptide sequence is the amino-terminus, and the right-hand end ofa polypeptide sequence is the carboxyl-terminus.

As used herein, the polypeptides include natural peptides, recombinantpeptides, synthetic peptides or a combination thereof. A peptide that isnot cyclic will have an N-terminus and a C-terminus. The N-terminus willhave an amino group, which may be free (i.e., as a NH₂ group) orappropriately protected (for example, with a BOC or a Fmoc group). TheC-terminus will have a carboxylic group, which may be free (i.e., as aCOOH group) or appropriately protected (for example, as a benzyl or amethyl ester). A cyclic peptide does not necessarily have free N- orC-termini, since they are covalently bonded through an amide bond toform the cyclic structure. The term “peptide bond” means a covalentamide linkage formed by loss of a molecule of water between the carboxylgroup of one amino acid and the amino group of a second amino acid.

As used herein, amino acids are represented by the full name thereof, bythe three letter code corresponding thereto, or by the one-letter codecorresponding thereto, as indicated below:

Full Name Three-Letter Code One-Letter Code Aspartic Acid Asp D GlutamicAcid Glu E Lysine Lys K Arginine Arg R Histidine His H Tyrosine Tyr YCysteine Cys C Asparagine Asn N Glutamine Gln Q Serine Ser S ThreonineThr T Glycine Gly G Alanine Ala A Valine Val V Leucine Leu L IsoleucineIle I Methionine Met M Proline Pro P Phenylalanine Phe F Tryptophan TrpW

A “polynucleotide” means a single strand or parallel and anti-parallelstrands of a nucleic acid. Thus, a polynucleotide may be either asingle-stranded or a double-stranded nucleic acid.

The term “nucleic acid” typically refers to large polynucleotides.

The term “oligonucleotide” typically refers to short polynucleotides,which are generally not greater than about 50 nucleotides. It will beunderstood that when a nucleotide sequence is represented by a DNAsequence (i.e., A, T, G, C), this also includes an RNA sequence (i.e.,A, U, G, C) in which “U” replaces “T.”

Conventional notation is used herein to describe polynucleotidesequences: the left-hand end of a single-stranded polynucleotidesequence is the 5′-end; the left-hand direction of a double-strandedpolynucleotide sequence is referred to as the 5′-direction.

The direction of 5′ to 3′ addition of nucleotides to nascent RNAtranscripts is referred to as the transcription direction. The DNAstrand having the same sequence as an mRNA is referred to as the “codingstrand;” sequences on the DNA strand which are located 5′ to a referencepoint on the DNA are referred to as “upstream sequences;” sequences onthe DNA strand which are 3′ to a reference point on the DNA are referredto as “downstream sequences.”

A “portion” of a polynucleotide means at least about twenty sequentialnucleotide residues of the polynucleotide. It is understood that aportion of a polynucleotide may include every nucleotide residue of thepolynucleotide.

“Primer” refers to a polynucleotide that is capable of specificallyhybridizing to a designated polynucleotide template and providing apoint of initiation for synthesis of a complementary polynucleotide.Such synthesis occurs when the polynucleotide primer is placed underconditions in which synthesis is induced, i.e., in the presence ofnucleotides, a complementary polynucleotide template, and an agent forpolymerization such as DNA polymerase. A primer is typicallysingle-stranded, but may be double-stranded. Primers are typicallydeoxyribonucleic acids, but a wide variety of synthetic and naturallyoccurring primers are useful for many applications. A primer iscomplementary to the template to which it is designed to hybridize toserve as a site for the initiation of synthesis, but need not reflectthe exact sequence of the template. In such a case, specifichybridization of the primer to the template depends on the stringency ofthe hybridization conditions. Primers can be labeled with, e.g.,chromogenic, radioactive, or fluorescent moieties and used as detectablemoieties.

“Probe” refers to a polynucleotide that is capable of specificallyhybridizing to a designated sequence of another polynucleotide. A probespecifically hybridizes to a target complementary polynucleotide, butneed not reflect the exact complementary sequence of the template. Insuch a case, specific hybridization of the probe to the target dependson the stringency of the hybridization conditions. Probes can be labeledwith, e.g., chromogenic, radioactive, or fluorescent moieties and usedas detectable moieties.

An “isolated nucleic acid” refers to a nucleic acid segment or fragmentwhich has been separated from sequences which flank it in a naturallyoccurring state, e.g., a DNA fragment which has been removed from thesequences which are normally adjacent to the fragment, e.g., thesequences adjacent to the fragment in a genome in which it naturallyoccurs. The term also applies to nucleic acids which have beensubstantially purified from other components which naturally accompanythe nucleic acid, e.g., RNA or DNA or proteins, which naturallyaccompany it in the cell. The term therefore includes, for example, arecombinant DNA which is incorporated into a vector, into anautonomously replicating plasmid or virus, or into the genomic DNA of aprokaryote or eukaryote, or which exists as a separate molecule (e.g, asa cDNA or a genomic or cDNA fragment produced by PCR or restrictionenzyme digestion) independent of other sequences. It also includes arecombinant DNA which is part of a hybrid gene encoding additionalpolypeptide sequence.

“Encoding” refers to the inherent property of specific sequences ofnucleotides in a polynucleotide, such as a gene, a cDNA, or an mRNA, toserve as templates for synthesis of other polymers and macromolecules inbiological processes having either a defined sequence of nucleotides(i.e., rRNA, tRNA and mRNA) or a defined sequence of amino acids and thebiological properties resulting therefrom. Thus, a gene encodes aprotein if transcription and translation of mRNA corresponding to thatgene produces the protein in a cell or other biological system. Both thecoding strand, the nucleotide sequence of which is identical to the mRNAsequence and is usually provided in sequence listings, and thenon-coding strand, used as the template for transcription of a gene orcDNA, can be referred to as encoding the protein or other product ofthat gene or cDNA.

Unless otherwise specified, a “nucleotide sequence encoding an aminoacid sequence” includes all nucleotide sequences that are degenerateversions of each other and that encode the same amino acid sequence.Nucleotide sequences that encode proteins and RNA may include introns.

As used herein, the term “plant” refers to a living organism belongingto the kingdom Plantae. Examples of plants are grasses, such asswitchgrass, rice, oats, wheat, barley, sorghum, millet, rye, triticale,buckwheat, fonio, quinoa, teff, wild rice, amaranth, kaniwa, spelt,einkorn, emmer, durum, and maize (corn). Preferably, the plant is riceor maize. Most preferably, the plant is maize.

As used herein, the term “effective amount” refers to a non-toxic butsufficient amount of an agent to provide the desired biological result.That result can be modulation of sexual differentiation in plants,suppression or enhancement of specific sexual phenotypes, or any otherdesired alteration of a plant phenotype. An appropriate effective amountin any individual case may be determined by one of ordinary skill in theart using routine experimentation.

As used herein, the term “agriculturally acceptable” refers to amaterial, such as a carrier or diluent, which does not abrogate thebiological activity or properties of the compound, and is relativelynon-toxic, i.e., the material may be administered to a plant withoutcausing undesirable biological effects or interacting in a deleteriousmanner with any of the components of the composition in which it iscontained.

As used herein, the term “agriculturally acceptable composition” refersto a mixture of at least one compound useful within the invention withagriculturally acceptable chemical components, such as carriers,stabilizers, diluents, dispersing agents, suspending agents, thickeningagents, and/or excipients. The agriculturally acceptable compositionfacilitates administration of the compound to a plant. Multipletechniques of administering an agriculturally acceptable compositionexist in the art including, but not limited to: watering, spraying,fumigation, aerolization, injecting, and dusting.

As used herein, the language “acceptable salt” refers to a salt of theadministered compounds prepared from agriculturally acceptable non-toxicacids including inorganic acids, organic acids, solvates, hydrates, orclathrates thereof. The compounds useful within the invention may formsalts with acids or bases, and such salts are included in the presentinvention. The term “salts” embraces addition salts of free acids orfree bases of the compounds useful within the invention. Preferred saltsare formed from cationic and anionic counterions that have been approvedor validated for agricultural applications. Unacceptable salts maynonetheless possess properties such as high crystallinity, which haveutility in the practice of the present invention, such as for exampleutility in process of synthesis, purification or formulation ofcompounds useful within this invention.

As used herein, the “instructional material” includes a publication, arecording, a diagram, or any other medium of expression that may be usedto communicate the usefulness of the compounds described herein. In someinstances, the instructional material may be part of a kit useful foreffecting the alleviating or treating the various diseases or disordersrecited herein. Optionally, or alternately, the instructional materialmay describe one or more methods of controlling plant sexuality. Theinstructional material of the kit may, for example, be affixed to acontainer that contains the compounds useful within the invention or beshipped together with a container that contains the compounds.Alternatively, the instructional material may be shipped separately fromthe container with the intention that the recipient uses theinstructional material and the compound cooperatively. For example, theinstructional material is for use of a kit; instructions for use of thecompound; or instructions for use of a formulation of the compound.

Compounds of the Invention

The compounds useful within the invention may be synthesized usingtechniques well-known in the art of organic synthesis or may be isolatedfrom natural sources.

In one aspect, the compound is jasmonic acid((1R,2R)-3-oxo-2-(2Z)-2-pentenylcyclopentaneacetic acid). In anotheraspect, the compound is a jasmonic acid ester. In yet another aspect,the compound is a jasmonic acid alkyl ester, jasmonic acid aryl ester,jasmonic acid heteroaryl ester, jasmonic acid arylakyl ester, andjasmonic acid heteroaryl ester. Non-limiting examples of j asmonic acidesters are methyl jasmonate (or jasmonic acid methyl ester), ethyljasmonate, n-propyl jasmonate, isopropyl jasmonate, n-butyl jasmonate,sec-butyl jasmonate, t-butyl jasmonate, methoxyethyl jasmonate, pentyljasmonate, phenyl jasmonate, 4-chloro jasmonate, 4-fluoro jasmonate,naphtyl jasmonate, benzyl jasmonate, pyridinyl jasmonate, phenylethyljasmonate and so on. In yet another aspect, the compound is methyljasmonate (methyl (1R,2R)-3-oxo-2-(2Z)-2-pentenylcyclopentaneacetate).

Acceptable base addition salts of compounds useful within the presentinvention include, for example, metallic salts and non-metallic salts.Metallic cationic counterions include alkali metal, alkaline earth metaland transition metal ions such as, for example, aluminum, bismuth,calcium, lithium, magnesium, neodymium, potassium, rubidium, sodium,strontium and zinc. Non-metallic cationic counterions include organicbasic amines such as, for example, ammonium, benethamine[N-benzylphenethylamine], benzathine [N,N′-dibenzylethylenediamine],betaine [(carboxymethyl)trimethylammonium hydroxide], camitine,clemizole [1-p-chloro-benzyl-2-pyrrolidin-1′-ylmethylbenzimidazole],chlorcyclizine [1-(4-chloro-benzhydryl)-4-methylpiperazine], choline,dibenylamine, diethanolamine, diethylamine, diethylammonium, diolamine,eglumine [N-ethylglucamine], erbumine [t-butylamine], ethylenediamine,heptaminol [6-amino-2-methylheptan-2-ol], hydrabamine[N,N′-di(dihydroabietyl)ethylenediamine], hydroxyethylpyrrolidone,imadazole, meglumine [N-methylglucamine], olamine, piperazine,4-phenyl-cyclohexylamine, procaine, pyridoxine, triethanolamine, andtromethamine [tris(hydroxymethyl)aminomethane]. All of these salts maybe prepared from the corresponding compound by reacting, for example,the appropriate acid or base with the compound.

Examples of such inorganic acids are hydrochloric, hydrobromic,hydroiodic, nitric, sulfuric, and phosphoric. Appropriate organic acidsmay be selected, for example, from aliphatic, aromatic, carboxylic andsulfonic classes of organic acids, examples of which are formic, acetic,propionic, succinic, camphorsulfonic, citric, fumaric, gluconic,isethionic, lactic, malic, mucic, tartaric, para-toluenesulfonic,glycolic, glucuronic, maleic, furoic, glutamic, benzoic, anthranilic,salicylic, phenylacetic, mandelic, embonic (pamoic), methanesulfonic,ethanesulfonic, pantothenic, benzenesulfonic (besylate), stearic,sulfanilic, alginic, galacturonic, and the like.

The compounds useful within the present invention may also be useful incombination with at least one additional compound useful for controllingplant sexuality. These additional compounds may comprise compoundsdescribed in the present invention or compounds, e.g., commerciallyavailable compounds, known to modify, modulate or alter plant sexuality.

In non-limiting examples, the compounds of the invention may be used incombination with at least one of the following compounds: ethylene,gibberelin and auxin.

A synergistic effect may be calculated, for example, using suitablemethods such as, for example, the Sigmoid-E_(max) equation (Holford &Scheiner, 19981, Clin. Pharmacokinet. 6: 429-453), the equation of Loeweadditivity (Loewe & Muischnek, 1926, Arch. Exp. Pathol Pharmacol. 114:313-326) and the median-effect equation (Chou & Talalay, 1984, Adv.Enzyme Regul. 22: 27-55). Each equation referred to above may be appliedto experimental data to generate a corresponding graph to aid inassessing the effects of the compound combination. The correspondinggraphs associated with the equations referred to above are theconcentration-effect curve, isobologram curve and combination indexcurve, respectively.

Administration/Dosage/Formulations

Routes of administration of any of the compositions of the inventioninclude, but are not limited to, watering, spraying, fumigation,aerolization, injecting, or dusting. Administration may involve, innon-limiting examples, direct surface application to an intact or cutportion of the plant, microinjection into a tissue or cell thereof, ormicro-bombardment, preferably under low pressure.

The regimen of administration may affect what constitutes an effectiveamount. The formulations of the invention may be administered to theplant at any stage of its development. Preferably, the formulations ofthe invention may be administered to the plant at the time ofinflorescence development, during which the sex determination process istaking place. In the case of most lines of maize, this time correspondsto the period when the developing inflorescence reaches approximately1.0 cm in height. At this stage of floral development, most maize plantspossess 6-8 fully expanded leaves. This precise inflorescence height andexpanded leaf number vary according to variety of maize andenvironmental growth conditions. Further, several divided dosages, aswell as staggered dosages, may be administered daily or sequentially, orthe dose may be continuously administered. Further, the dosages of theformulations may be proportionally increased or decreased as indicatedby the exigencies of the situation.

Administration of the compositions of the present invention to a plant,preferably a grass-related plant, more preferably maize, may be carriedout using known procedures, at dosages and for periods of time effectiveto modulate the plant sexuality. An effective amount of the compoundnecessary to achieve the desired sexuality modulation may vary accordingto factors such as the nature of the plant, its age, status andlocation; and the ability of the compound to modulate plant sexuality.Dosage regimens may be adjusted to provide the optimum response. Forexample, several divided doses may be administered daily or the dose maybe proportionally reduced as indicated by the exigencies of thesituation. A non-limiting example of an effective dose range for acompound useful within the invention is from about 0.001 to 1,000 mg/kgof plant weight/per day. In a non-limiting example, an individual plantis treated with 1 mL of a 1 mM solution of a jasmonic acid derivative,and the treatment is performed three times at 48-hour intervals. One ofordinary skill in the art would be able to study the relevant factorsand make the determination regarding the effective amount of thecompound without undue experimentation.

Actual dosage levels of the active ingredients in the compositions ofthis invention may be varied so as to obtain an amount of the activeingredient that is effective to achieve the desired response for aparticular plant, without being toxic to the plant.

A plant specialist, e.g., botanist or agricultural technician, havingordinary skill in the art may readily determine and prescribe theeffective amount of the composition required. For example, the plantspecialist could start doses of the compounds useful within theinvention at levels lower than that required in order to achieve thedesired effect and gradually increase the dosage until the desiredeffect is achieved.

In one embodiment, the compositions of the invention are formulatedusing one or more agriculturally acceptable excipients or carriers. Inone embodiment, the compositions of the invention comprise an effectiveamount of a compound of the invention and an agriculturally acceptablecarrier.

In one embodiment, the compositions of the invention are administered tothe plant in dosages that range from one to five times at two-dayintervals. In another embodiment, the compositions of the invention areadministered to the plant in range of dosages that include, but are notlimited to, once every day, every two, days, every three days to once aweek, and once every two weeks. In another embodiment, the compositionof the invention is applied once to the plant as a slow-releasepreparation. It will be readily apparent to one skilled in the art thatthe frequency of administration of the various combination compositionsof the invention will vary from plant to plant, depending on manyfactors including, but not limited to, age, disease or disorder to betreated, gender, overall health, and other factors. Thus, the inventionshould not be construed to be limited to any particular dosage regimeand the precise dosage and composition to be administered to any plantwill be determined by the plant specialist based on the evaluation ofthe plant in question.

In one embodiment, the present invention is directed to a packagedagriculturally acceptable composition comprising a container holding aneffective amount of a compound of the invention, alone or in combinationwith a second agricultural agent; and instructions for using thecompound to modulate plant sexuality.

The term “container” includes any receptacle for holding theagriculturally acceptable composition. For example, in one embodiment,the container is the packaging that contains the agriculturalcomposition. In other embodiments, the container is not the packagingthat contains the agricultural composition, i.e., the container is areceptacle, such as a box or vial that contains the packagedagricultural composition or unpackaged agricultural composition and theinstructions for use of the agricultural composition. Moreover,packaging techniques are well known in the art. It should be understoodthat the instructions for use of the agricultural composition may becontained on the packaging containing the agricultural composition, andas such the instructions form an increased functional relationship tothe packaged product. However, it should be understood that theinstructions may contain information pertaining to the compound'sability to perform its intended function, e.g., modulating plantsexuality.

Those skilled in the art will recognize, or be able to ascertain usingno more than routine experimentation, numerous equivalents to thespecific procedures, embodiments, claims, and examples described herein.Such equivalents were considered to be within the scope of thisinvention and covered by the claims appended hereto. For example, itshould be understood, that modifications in reaction conditions,including but not limited to reaction times, reaction size/volume, andexperimental reagents, such as solvents, catalysts, pressures,atmospheric conditions, e.g., nitrogen atmosphere, andreducing/oxidizing agents, with art-recognized alternatives and using nomore than routine experimentation, are within the scope of the presentapplication.

It is to be understood that wherever values and ranges are providedherein, all values and ranges encompassed by these values and ranges,are meant to be encompassed within the scope of the present invention.Moreover, all values that fall within these ranges, as well as the upperor lower limits of a range of values, are also contemplated by thepresent application.

The following examples further illustrate aspects of the presentinvention. However, they are in no way a limitation of the teachings ordisclosure of the present invention as set forth herein.

EXAMPLES

The invention is now described with reference to the following Examples.These Examples are provided for the purpose of illustration only, andthe invention is not limited to these Examples, but rather encompassesall variations that are evident as a result of the teachings providedherein.

Materials and Methods Genetic Stocks and Mutants

Wild-type maize inbred lines W22, B73 and Mo17 were used. The ts1-refallele was previously described (Emerson, 1920, J. Hered. 11:65; Emersonet al., 1935, Cornell Univ. Agric. Exp. Stn. Memoir 180).ts1-69-Alex-Mo17 was identified as a spontaneous mutant in Mo17; andts1-0174 was discovered in an unknown genetic background. These threealleles were obtained from the Maize Genetics Cooperation Stock Center,Maize COOP (University of Illinois, Urbana/Champaign, Ill.). Thets1-MuSH and ts1-SH04 alleles were obtained from Plant Gene ExpressionCenter, United States Department of Agriculture—Agricultural ResearchService and the University of California, Albany, Calif.). The ts1-Mu92and ts1-Mu93 alleles were recovered in progeny of self-pollinated maizeplants known to contain active Mutator (Mu) elements (Monsanto, CreveCoeur, Mo.).

The remaining alleles, ts1-Mu01 and ts1-Mu02, were isolated by genetagging over the course of several generations of testcrosses ofts1-ref/ts1-ref plants to Mutator lines. In brief, ts1-ref mutant plantswere crossed to a W22 line carrying actively transposing Mu elements.Since ts1-ref is a recessive mutation, only wild-type plants areexpected from such a cross unless a new ts1 mutant allele is recoveredin any gametes of the Mu-active W22 line. About 40,000 individuals ofthis cross were grown during the summer seasons of 2001 and 2002. Plantsshowing a tasselseed phenotype, potentially containing new ts1 mutantalleles, were outcrossed to the W22 inbred line for at least twogenerations in order to segregate the new alleles and to reduce thenumber of active Mu elements in the genome. Additionally, these F1plants were crossed to ts1-ref mutants to confirm allelism. Thets1-linked hlml marker was used to distinguish the new ts1 mutantalleles from the original ts1-ref allele in the first outcrossedgeneration. Homozygotes for the new allele were usually obtained in thethird generation by self-pollinating heterozygous F2 plants.

ts1 Mapping Populations

Since the ts1 mutant plants are completely feminized, the ts1-ref stockwas maintained by sib mating ts1-ref/ts1-ref with ts1-ref/Ts1. These sibmatings were used to generate the original mapping population (n=93),which was selected for plants phenotypically scored as ts1/ts1 mutants.Any ts1-ref/ts1-ref plant carrying one or more of the linked molecularmarkers in a heterozygote state were deemed to be recombinant betweenthe heterozygous marker and the ts1 locus. Once ts1 tightly-linkedflanking markers were identified, they were subsequently used to screenthree additional testcross populations containing both heterozygotewild-type plants and plants homozygous for the mutant ts1-ref allele.Two of these populations (n=119) also come from the sib matingts1-ref/ts1-ref x ts1-ref/Ts1, while another mapping population (n=208)carried a wild-type Ts1 allele from the inbred W22 (ts1-ref/ts1-ref xts1-ref/Ts1-W22).

Molecular Marker Development

Candidate marker sequences were selected through genetic, physical andrice-maize synteny mapping. These sequences usually corresponded to (a)maize BAC ends or ESTs deposited in GenBank (NIH; Benson et al., 2008,Nucleic Acids Research 36(Database issue):D25-30) ; or (b) rice genesannotated in the regions syntenic to maize intervals at Gramene (ColdSpring Harbor Laboratory, www.gramene.org). Candidate sequences wereanalyzed by BLAST through the TIGR Maize Database. Maize sequencescorresponding to repetitive DNA were not further considered for markerdesign. Non-repetitive DNA sequences were selected for markerdevelopment and in some cases these sequences were extended by alignmentwith AZM sequences (TIGR).

Candidate marker sequences were PCR-amplified from genomic DNA of W22,ts1-ref/Ts1 and ts1-ref/ts1-ref plants. In a few instances, the PCRproducts had size polymorphisms easily resolved by agarose gelelectrophoresis. In most cases, however, the PCR products had the sameapparent size. In these cases, the PCR products were sequenced andexamined for the presence of SNPs. If present, SNPs that representeddifferences in restriction enzyme recognition sites were used as CAPS(Cleaved Amplified Polymorphic Sequences) markers (Konieczny & Ausubel,1993, Plant J. 4:403) to distinguish between the different alleles inthe mapping population.

New markers were initially evaluated in 20 non-recombinant individualsof known phenotype to confirm co-segregation of the marker with theappropriate ts1 allele. This was necessary to prevent the use of markerscorresponding to a duplicate region of the ts1 interval in chromosome 10or to repeat sequences that have “escaped” filtering in the repeatdatabase. Table 1 displays the features of the molecular markersdefining the ts1 genetic region.

TABLE 1 Molecular markers used for mapping the ts l locus Product Primersize Marker Type* pair ID Primer sequence (listed 5′ to 3′) (bp)†CC760183 CAPS 1533 CACAGGAGATTCTGTACTGTGACCA 663 (Tsp509I) A (SEQ IDNO: 1) 1541 TGCAATGACAAGGGTATTCATGTG (SEQ ID NO: 2) hlm1 CAPS 835CTCTCATAACACACACAAGCCTCT 1200 (ScrFI) (SEQ ID NO: 3) 836AGCTACCTTTCTGGAGGGTGAAGAA (SEQ ID NO: 4) umc2251‡ SSR 1516CCTGAATCGCTCATTCGCTC 178 (SEQ ID NO: 5) 1517 GTCGAGGGTTTGGAGGAGAGAC (SEQID NO: 6) *CAPS, Cleaved Amplified Polymorphic Sequence; restrictionenzymes used for CAPS marker analysis are indicated in parenthesis. SSR,Simple Sequence Repeat (Microsatellite) †Size corresponds to the allelefound in inbred line B73 ‡Previously reported SSR

Evaluation of PCR-Based Molecular Markers

PCR primers were designed with Primer3 (Rozen & Skaletsky, 2000, MethodsMol. Biol. 132:365) and synthesized by the W. M. Keck FoundationBiotechnology Resource Laboratory (Yale University, New Haven, Conn.).PCR-based markers were routinely amplified with Taq DNA polymerase(Qiagen, Valencia, Calif., USA) in 20 μl reactions containing 1× PCRbuffer and 1× Q-Solution supplied by the manufacturer, 200 μM of eachdNTP, 500 nM of each primer and 2.5 ng/μl genomic template DNA.Q-Solution contains the chemical betaine, which improves theamplification of DNA by reducing the formation of secondary structure inGC-rich regions. The addition of Q-Solution to the PCR reaction wasmandatory for amplification of most maize sequences, which have high GCcontents. Q-solution was excluded only for target sequences with <50% GCcontent. PCR cycling conditions were as follows: 95° C. (3 minutes); 35cycles of 95° C. (30 seconds), 59-63° C. (30 seconds), 72° C. (1minute/1 kb); 72° C. (10 minutes). Annealing temperature was variable,adjusted to 3 to 5° C. below the Primer3-calculated Tm of the primersused in each assay.

Southern Blot Analysis

Southern blot hybridization was performed with a published protocol(Dellaporta & Moreno, in “The Maize Handbook”, M. Freeling, V. Walbot,Eds., Springer Verlag, New York, 1993, pp. 569-572), except that thehybridization solution consisted of 0.25 M sodium phosphate, pH 7.2 and7% SDS, as suggested by the manufacturer of the Zeta-Probe GT blottingmembranes (Biorad, Hercules, Calif., USA). The hybridization probeconsisted of a 624 bp fragment from the ts1-W22 gene (bases 2590-3213,spanning the end of exon 5 through the beginning of exon 7) and boresufficient similarity to the duplicate ts1b gene (87-90%) so that bothts1 and ts1b were detected.

Phylogenetic Analysis

Sixty-four plant lipoxygenase amino acid sequences (Table 2), includingthat of TS1 and TS1b, were aligned with ClustalW2 (Chenna et al., 2003,Nucleic Acids Res. 31:3497). Two different algorithms, maximum parsimonyand Bayesian inference, were employed to estimate phylogeneticrelationships of TS1 and related proteins. Maximum parsimony wasimplemented in PAUP* 4.0b10 (Swofford, “PAUP*, Phylogenetic AnalysisUsing Parsimony (* and other methods)”, Sinauer Associates, Sunderland,Mass., 1998) where the heuristic search option was applied with defaultvalues. Bootstrap values for the maximum parsimony tree were obtained byresampling 1,000 replicates under the full heuristic search method.Bayesian inference was performed with MrBayes 3.1.2 (Huelsenbeck &Ronquist, 2001, Bioinformatics 17:754) with a mixed amino acidsubstitution model, four independent chains run for 5,000,000generations, and sampling every 1000th tree. Convergence was estimatedwhen the standard deviation of split frequencies reached a plateauapproaching zero, and the consensus tree was determined with a burn-inof 25% (1250 trees).

TABLE 2 Plant lipoxygenase sequences used in TS1 phylogenetic analysisOrganism Sequence ID GenBank Accession Arabidopsis thaliana AtLOX1Q06327 AtLOX2 P38418 AtLOX3 Q9SMW1 AtLOX4 Q9FNX8 AtLOX5 Q9FNX7 AtLOX6Q9CAG3 Cucumis sativus CsLOX2 AAA79186 CsLOX3 CAA63483 CsLOX4 CAB83038Glycine max GmLOX1 P08170 GmLOX2 P09439 GmLOX3 P09186 GmLOX4 P38417GmLOX6 AAA96817 GmLOX7 P24095 Hordeum vulgare HvLOX1 P93184 HvLOX2Q8GSM3 HvLOX3 Q8GSM2 HvLOX4 CAI84707 HvLOXA P29114 HvLOXB AAB60715HvLOXC AAB70865 Lens culinaris LcLOX1 P38414 Lycopersicon esculentumLeLOX1 P38415 LeLOX2 P38416 LeLOX3 AAG21691 LeLOX4 Q96573 LeLOX5 Q96574Nicotiana attenuata NaLOX1 AAP83136 NaLOX2 AAP83137 NaLOX3 AAP83138Nicotiana tabacum NtLOX1 CAA58859 Oryza sativa OsLOX1 Q76I22 OsLOX10Q0DJB6 OsLOX2 P29250 OsLOX2.3 Q6H7Q6 OsLOX3 Q7G794 OsLOX3b Q53RB0 OsLOX5Q7XV13 OsLOX6 Q8H016 OsLOX7 P38419 OsLOX8 Q84YK8 OsLOX9 Q0IS17 OsLOXRCI1Q9FSE5 Pisum sativum PsLOX1 AAB71759 PsLOX2 P14856 PsLOX3 P09918 PsLOX7CAC04380 PsLOX8 CAA75609 PsLOX9 CAG44504 PsLOXG CAA53730 Phaseolusvulgaris PvLOX1 P27480 PvLOX1b AAB18970 PvLOX2b AAG42354 PvLOX2cAAF15296 Solanum tuberosum StLOX1 CAA64765 StLOX2 AAD09202 StLOX3AAB67865 StLOX4 CAA65268 StLOX5 CAA65269 Zea mays ZmLOX1 AAL73499 ZmLOX2AAF76207Quantitative RT-PCR Analysis (qRT-PCR)

Maize plants from inbred line W22 were grown in the greenhouse. Alltissue samples used for qRT-PCR assays were quickly dissected andimmediately frozen in liquid nitrogen. Approximately 100 mg of frozentissue were ground in a mortar and pestle and quickly re-suspended in 1ml of Trizol® Reagent (Invitrogen, Carlsbad, Calif., USA). Developinginflorescences between 0.8 and 3 cm in length were directly placed in1.5 ml microcentrifuge tubes, resuspended in 1 ml of Trizol® reagent andground with a plastic pestle attached to a table top drill press. TotalRNA was isolated according to manufacturer's recommendations andre-suspended in water previously treated with diethylpyrocarbonate(DEPC; Sigma, St. Louis, Mo., USA) containing 20 units of ProtectorRNase Inhibitor (Roche, Indianapolis, Ind., USA).

Prior to cDNA synthesis, 1 μg of total RNA was treated with 1 unit ofDNase I, Amplification Grade (Invitrogen) in a 10 μl reaction containing1× DNase I buffer supplied by the manufacturer. The reaction proceededfor 15 minutes at room temperature and the enzyme was inactivated byadding 1 μl of 25 mM EDTA and heating at 65° C. for 10 min. TheDNase-treated RNA (1 μg) was directly used in cDNA synthesis with theSuperScript® III First-Strand Synthesis SuperMix for qRT-PCR(Invitrogen) following the manufacturer's instructions. The 2× RTReaction Mix included both oligo(dT)20 and random hexamers to prime thereverse transcription reaction. The cDNA was diluted to 100 μl with 1×TE and stored at −80° C. PCR reactions were performed in optical 96-wellplates with a 7500 Fast Real-Time PCR System sequence detection system(Applied Biosystems, Foster City, Calif., USA). Reactions contained 1×Power SYBR Green Master Mix reagent (Applied Biosystems), 300 nM of eachgene-specific primer (Table 3) and 1 μl of diluted cDNA in a finalvolume of 25 μl. The standard thermal profile recommended by themanufacturer of the PCR master mix was followed. Three technical (PCR)replicates were set up for each one of the three biological replicatesof each tissue sample. qRT-PCR data were normalized with actinl as areference gene.

TABLE 3 Primers used for quantitative qRT-PCR analysis Target PrimerPrimer sequence gene pair ID (listed 5′ to 3′) actin1 213CATGAGGCCACGTACAACTCCATC (SEQ ID NO: 7) 214 TCATACTCTCCCTTGGAGATCCAC(SEQ ID NO: 8) ts1 2221* GCTGCCGTACGAGCTCATGG (SEQ ID NO: 9) 1894 TCCTTTCAGATCATCTCTGTCATGC (SEQ ID NO: 10) ts1b 2221*GCTGCCGTACGAGCTCATGG (SEQ ID NO: 11) 2648† TTGGAGATCGGGGAGAAGACTAAA (SEQID NO: 12) ts2 2264  GTGGAGAAGATGGAGGAGGTGGT (SEQ ID NO: 13) 2306 ATTGATTCACAAGCCGATGAGGTT (SEQ ID NO: 14) *The specificity for ts1 andts1b is achieved with the reverse primers P1894 and P2648, respectively†P2648 is specific for the ts1-W22 allele

In Situ Hybridization

Primers P1930 (5′-CCTCTCAGTACCGACAGACAGC-3′; SEQ ID NO:15) and P1931(5′-CCATTCAGTTCCTCACAGTCTTGC-3′; SEQ ID NO:16) were used to amplify a217 bp fragment of the ts1 gene corresponding to part of the 3′ UTR. ThePCR product was cloned into the pCRII-TOPO® vector (Invitrogen)generating pYU1672, the plasmid used for synthesis of the ts1 in situprobe. The ts2 in situ hybridization probes have been previouslydescribed (DeLong et al., 1993, Cell 74:757) and are contained in theplasmids pYU59 and pYU60.

In situ hybridizations were performed as described (D. Jackson, in“Plant Molecular Pathology: A Practical Approach,” S. J. Gurr, M. J.McPherson, D. J. Bowles, Eds., Oxford University Press, Oxford, 1992,vol. I, pp. 163-174) with modifications as described (Bortiri et al.,2006, Plant Cell 18:574). Three additional modifications were adopted:(a) no RNase treatment was performed after hybridizations; (b) theanti-DIG antibody was diluted 1/1000 and incubated for 2 hr at roomtemperature; (c) the buffer used for color detection included 10%polyvinyl alcohol (PVA) to increase reaction sensitivity.

Construction of a ts1:mCherry Fusion Gene

The mCherry gene was PCR amplified with PfuUltra™ High-Fidelity DNAPolymerase (Stratagene, La Jolla, Calif., USA) from the pREST-B mCherryvector (S12) with primers P2672(5′-cggggtaccccATGGTGAGCAAGGGCGAGGAGGAT-3′; SEQ ID NO:17) and P2673(5′-ctagtctagatggatccCTTGTACAGCTCGTCCATGCCGCC-3′; SEQ ID NO:18), whichadded KpnI, NcoI and BamHI, XbaI sites respectively (lower case lettersin primer sequences). The PCR product did not contain the endogenousstop codon. Instead, P2673 provided a new stop codon in the XbaI sitedownstream of the BamHI site. The PCR product was digested with KpnI andXbaI and the 733 by KpnI-XbaI mCherry fragment was gel purified. PlasmidpYU1721 was derived from the plant expression vector pRTL2 (Restrepo etal., 1990, Plant Cell 2:987) and contained the full-length ts1 CDSwithout the stop codon (ts1ΔSTOP) fused in frame with the gene encodingthe monomer Red Fluorescent Protein (mRFP1) (construction details areavailable upon request). pYU1721 was digested with KpnI and XbaI torelease the mRFP1 gene. The remaining ˜6.5 kb plasmid containing pRTL2plus the ts1ΔSTOP CDS was gel purified and ligated to the 733 bpKpnI-XbaI mCherry gene. The resulting plasmid, pYU1743, was shown bysequencing to contain an in-frame N-terminus fusion of the ts1ΔSTOP CDSto the mCherry gene.

Biolistic Experiments in Onion Epidermal Cells

One microgram of plasmid DNA was precipitated on gold particles (1.0Biorad) essentially as described (Kleinet et al., 1987, Nature 327:70).Onion (Allium cepa L.) bulbs were cut in small pieces. The epidermalcell layers were carefully peeled and transferred to the surface ofPetri dishes containing Murashige and Skoog basal medium (MS fromInvitrogen, or Sigma-Aldrich, St. Louis, Mo. USA) solidified with 3.5%Phytagel (Sigma-Aldrich). Epidermal cell layers were bombarded with aBiolistic PDS 1000/He Particle Delivery System (Biorad) with 1350 psirupture discs. After bombardment the plates were incubated at 27° C. indarkness for 8-20 h. The epidermal cell layers were then stained for 10minutes in 1 μg/ml DAPI dissolved in 1× PBS then washed for 10 minutesin 1× PBS and mounted in glass slides with 70% glycerol in 1× PBS.

Epifluorescence Microscopy, Photography and Image Analysis

Transformed cells were examined by epifluorescence microscopy with anAxioplan 2 microscope (Carl Zeiss Microimaging, Thornwood, N.Y., USA)with the appropriate excitation/emission filters. DifferentialInterference Contrast (DIC or Nomarski microscopy) was used to visualizecells under transmitted light. Digital images were captured with a ZeissAxiocam with several Image Acquisition Modules of the Zeiss Axiovisionsoftware. The Multichannel Fluorescence module allowed the sequentialacquisition of DAPI, GFP, mCherry and DIC images for each sample. Theonion epidermal cell layer is very thick and not all cell featuresappear in the same focal plane. Therefore, a series of images over adefined z-focus range were acquired with the Z-Stack module ofAxiovision. This module automatically calculated the distance betweenindividual images of the z-stack to achieve the maximum axial resolutionof the objective used. The Z-stack was reconstructed with the 3DDeconvolution module where the Regularized Inverted Filter (RIF) methodwas used. Final image display was completed by applying a maximumintensity projection (MIP) over the entire image volume within thecontext of the orthogonal slice view (Cut View). The Colocalizationmodule was used to quantitatively assess the colocalization of theTS1:mCherry red fluorescent signal along with the RbcSnt:GFP greenfluorescent signal.

Example 1 Positional Cloning and Mapping of ts1

The molecular marker hlml was isolated from the flanking sequence of aMu4 element that was identified as tightly linked to the ts1-Mu92mutation. The hlm1 marker was mapped approximately 1 cM from ts1 in asmall testcross population (n=93) segregating for the ts1-ref allele.The maize ZMMBBb BAC library (CUGI) was probed with hlm1 and six BACclones from contig 78 of the current maize physical map (ArizonaGenomics Institute) were identified. A marker within this contig,umc2251, was tested for linkage and found to map distal to both ts1 andhlm1—8 and 9 cM respectively (FIG. 1). Therefore, the genetic intervalcontaining ts1 was initially defined as a 9 cM region by the proximalhlm1 and the distal umc2251 markers. To further refine this interval,BAC end sequences in the physical region proximal to umc2251 wereanalyzed for potential low copy sequences. A molecular marker designedfrom the end sequence of BAC b0148G01 (CC760183) was tested and found tomap 1 cM distal to ts1 (FIG. 1). A larger mapping population (totaln=420) was analyzed with CC760183 and hlm1 and a total of 3 distal and 4proximal recombinants to ts1 were detected. This analysis placed ts1within a ˜1.6 cM genetic interval defined by the proximal hlm1 and thedistal CC760183 markers, which spanned a physical region of ˜500 kb(FIG. 1).

A genomic sequence (AZM4_115428) corresponding to hlm1 was identified inthe TIGR AZM 4.0 assembly of the maize methyl-filtered and high-Cotgenomic libraries which consists of sequences highly enriched for codingregions (Palmer et al., 2003, Science 302:2115; Whitelaw et al., 2003,Science 302:2118). Orthologs of CC760183 and AZM4_115428 were annotatedin the rice genome delineating a 62 kb syntenic region that contained 9predicted genes.

Example 2 Predicted Function of TS1 Protein

The ts1 gene was thus located in a region with extensive synteny withrice (Salse et al., 2004, Plant J. 38:396). Out of the nine genescontained in the ts1 syntenic interval within the sequenced genome ofrice, no maize orthologs were found for four of these genes, and anotherthree were mapped to locations unlinked to the ts1 locus in maize. Maizehomologs of the remaining two rice genes, one encoding a putativeglutamate decarboxylase and the other encoding a putative lipoxygenase,were confirmed to be contained within the ts1 physical interval (FIG.1).

Sequencing showed that the gene encoding glutamate decarboxylase wasmonomorphic, whereas the gene encoding lipoxygenase in the ts1-ref lineshowed an 864-base pair (bp) insertion in the predicted first exon withcomplete linkage with the ts1 phenotype in mapping populations. Toconfirm that the lipoxygenase corresponded to the ts1 gene, eight tslmutant alleles were analyzed. Each contained an independent mutation inthe gene encoding lipoxygenase (FIG. 2A, and Table 3). Complementary DNAsequence analysis showed that the ts1 gene contains seven exons with acoding sequence of 2757 bp (FIG. 1). A closely related gene was alsoidentified in the database of the TIGR AZM 4.0 assembly and by Southernblot analysis (FIG. 3). This gene, named ts1b, has an identicalexon-intron structure to that of ts1 and shares 93% nucleotidesimilarity. The ts1b gene is located on maize chromosome 10S, asegmental duplication of chromosome 2S (Gaut, 2001, Genome Res. 11:55).The TS1 protein displays 38 to 60% similarity to plant lipoxygenases andcontains two conserved domains characteristic of this family: abeta-barrel (cd01751) and a catalytic helical bundle (pfam00305)(Shibata & Axelrod, 1995, J. Lipid Mediat. Cell Signal. 12:213) (FIG.2B, and FIGS. 4A-4C).

Lipoxygenases are non-heme iron-containing fatty acid dioxygenases thatcatalyze the peroxidation of polyunsaturated fatty acids such aslinoleic acid, α-linolenic acid, and arachidonic acid. They areclassified according to the positional specificity of linoleic acidoxygenation, which occurs at carbon 9 of the hydrocarbon backbone forthe 9-LOX types and at carbon 13 for the 13-LOX types; a furthersubdivision (classes 1 and 2) has been recognized for 13-lipoxygenaseswithout or with a putative chloroplast transit peptide (cTP),respectively (Feussner & Wasternack, 2002, Annu. Rev. Plant Biol.53:275). According to ChloroP, a neural network-based method forpredicting cTPs, the N-terminal 48 amino acids of the TS1 proteincontain a cTP (Emanuelsson et al., 1999, Protein Sci. 8:978) (FIG. 2B,and FIGS. 4A-4C). Additionally, TS1 contains a conserved phenylalanine(Phe636) previously identified as a determinant of 13-LOXregiospecificity (Hornung et al., Proc. Natl. Acad. Sci. U.S.A. 96:4192;Liavonchanka & Feussner, 2006, J. Plant Physiol. 163:348). Therefore,the primary structure of TS1 suggests that it is a member of the class 2plastid-localized 13-lipoxygenases. This prediction was supported byBayesian and maximum parsimony phylogenetic analyses of plantlipoxygenases, which placed TS1 and TS1b in a clade includingcharacterized and predicted class 2 13-lipoxygenase (FIG. 2C, and FIGS.5A-5B).

TABLE 3 Characterization of nine ts1 mutant alleles ts1 mutation(Sequences listed 5′ to 3′ on Genetic Allele coding strand) Locationbackground Source ts1-ref 864 by unknown insertion; 233-241 UnknownEmerson, 1920, 9 by target site duplication (exon 1) J. Hered. 11: 65(ACCCCCAGA) ts1-Mu93 Mu8 insertion; 932-941 Unknown P. Chomet & B. Lowe10 bp target site duplication (exon 2) (CGTTGACGGG) (SEQ ID NO: 19)ts1-0174 1828 by unknown insertion; 1020-1025 Unknown G. F. Sprague 6 bptarget site duplication (exon 2) & COOP (GGCTTT) ts1-Mu92 C→Gtransversion; 1308 Unknown P. Chomet results in nonsense substitution(exon 2) and B. Lowe Q288>STOP ts1-MuSH MuDR insertion; 9 bp target site2032-2040 Unknown S. Hake duplication (exon 4) (GGCTGCGGG) ts1-AlexSingle base pair deletion; 2419 Mo17 D. E. Alexander/ results inframeshift (exon 5) Maize COOP ts1-SH04 Six bp insertion 3343-3344 W22S. Hake (GAGAAG); (exon 7) results in extra glycine and glutamic acidts1-Mu02 ~3,600 bp unknown insertion 3655-3659 W22 this disclosure with311 bp terminal repeats; (exon 7) 5 bp target site duplication (TCCAC)ts1-Mu01 Large deletion (unknown size) — W22 this disclosure

Example 3 Tissue-Specific Expression of ts1 and ts1b Genes

The tissue-specific expression of both ts1 and ts1b was established byquantitative reverse transcription polymerase chain reaction (RT-PCR)analysis of root, stem, leaf, tassel, and ear transcripts. The ts1 RNAwas detected in all maize tissues examined, whereas ts1b RNA wasdetected at very low levels (less than that of tsl by a factor of 90 to500) (FIGS. 6A-6I). The low expression of ts1b may explain why it doesnot also appear to be a component of sex determination in ts1 mutantplants. The broad expression of ts1 was unexpected because its mutantphenotype suggests a sex-specific function. Although no alterations inother tissues have been reported, it is possible that additionalphenotypes for the ts1 mutation may be uncovered by more carefulanalyses. The ts2 gene was expressed almost as broadly as ts1, except instem tissue, where expression was less than that of ts1 by a factor of˜35.

In situ hybridization showed that TS1 transcripts form stripes followingthe borders of the central inflorescence axis and projecting toward thespikelet attachment points (FIGS. 6B and 6D). In spikelet adaxial views,TS1 expression domains surround the spikelets, delineating their base(FIG. 6C). None of these expression patterns were observed in ahomozygous ts1-Mu01 deletion mutant line containing a functional tslbgene (FIG. 6E). These observations indicate that TS1 transcripts subtendmaize spikelets at their junction with the central inflorescence axis(rachis). This expression domain suggests a function for TS1, asmetabolites synthesized through the lipoxygenase encoded by ts1 couldact as diffusible signals affecting floral development in anon-cell-autonomous fashion.

The ChloroP-based prediction that TS1 localizes in plastids wasconfirmed with a fluorescent-tagged TS1 protein (TS1:mCherry) and aplastid-localized RbcSnt:GFP protein (Lee et al., 2002, Mol. Cells14:388). To quantitatively assess the colocalization of RbcSnt:GFP andTS1:mCherry fluorescent signals, correlation analysis of the intensityvalues of color (green and red) pixels in the dual-channel image wasperformed. Specifically, the Colocalization module in the Axiovisionsoftware (Carl Zeiss Microimaging, Thornwood, N.Y., USA) plotted thepixel grey values of fluorescent intensity of the x-axis and y-axischannels against each other (FIG. 6I). Then, correlation coefficientswere calculated to measure the strength of the linear relationshipbetween the two variables (Bolte & Cordelieres, 2006, J. Microsc.224:213; Manders et al., 1992, J. Cell Sci. 103:857). The images inFIGS. 6E and 6F showed a Manders' overlap coefficient of 0.986 stronglyindicating colocalization between the two signals. Additionally,weighted co-localization coefficients M1 and M2, which are independentof differences in fluorescence intensity between the two channels, werecalculated. For TS1:mCherry, M2=0.906, indicating that a high proportionof red signal coincided with a signal in the green channel over itstotal intensity (Bolte & Cordelieres, 2006, J. Microsc. 224:213; Manderset al., 1992, J. Cell Sci. 103:857). A similar conclusion was drawn forthe weighted co-localization coefficient of RbcSnt:GFP (M1=0.903),indicating that TS1:mCherry protein is targeted to the same subcellularcompartment as RbcSnt:GFP. TS1 is thus targeted to plant plastids.

Example 4 Analysis of Lipoxygenase Activity in Crude Protein Extractsfrom Tassel Inflorescences

Frozen tassels were ground in liquid nitrogen and/or homogenized in a1.5-ml microcentrifuge tube with 1 to 2 volumes of ice-cold 0.1 M Trisbuffer, pH 7.5, containing 0.1 M NaCl, 5 mM EDTA, 0.1%β-mercaptoethanol, 0.6% Triton X-100, 1 mM PMSF and EDTA-free ProteaseInhibitors (Roche, Indianapolis, Ind., USA). The mixture was clarifiedby centrifugation at 14,000×g for 30 minutes at 4° C. The supernatantwas transferred to a new tube and total protein concentration estimatedwith the Micro BCA Protein Assay Kit (Pierce, Rockford, Ill., USA).

Aliquots of crude protein extracts were added to 3 ml of potassiumphosphate buffer, pH 6.0 containing 150 uM linoleic acid and stirred at23° C. for 15 min. Peroxidation products were reduced to hydroxides,HOD) by adding 12 ml of a solution of 5 mg/ml SnCl₂ in ethanol andincubating for another 5 minutes at 23° C. Products isolated byextraction with diethyl ether were methyl-esterified and analyzed byGC-MS and HPLC. For all analyses, reference oxylipins of high chemicalpurity (Larodan Fine Chemicals, Malmo, Sweden) were used. Material to beanalyzed by GC-MS was derivatized by treatment withtrimethylchlorosilane/hexamethyldisilazane/pyridine (2:1:2, v/v/v) atroom temperature for 15 min. Excess reagent and solvent were removed invacuo and the residue was resuspended in hexane. GC-MS was carried outwith a mass-selective detector (Hewlett-Packard model 5970B, Avondale,Pa., USA) connected to a gas chromatograph (Hewlett-Packard model 5890)equipped with a capillary column of 5% phenylmethylsiloxane (12 m, 0.33μm film thickness). Helium was used as the carrier gas, and the columntemperature was raised from 120° C. to 300° C. at 10° C./min.

SP-HPLC of methyl-esterified incubation products was carried out with acolumn of Nucleosil 50-5 (250×4.6 mm) purchased from Macherey-Nagel,Duren, Germany, and a solvent system of 0.6% 2-propanol/hexane at a flowrate of 2 ml/min. The absorbance (234 nm) and radioactivity of HPLCeffluents were determined on-line with a Spectromonitor III ultravioletdetector (Laboratory Data Control, Riviera Beach, Fla., USA) and aliquid scintillation counter (IN/US Systems, Tampa, Fla., USA),respectively. Under the conditions used, the elution order ofhydroxyoctadecadienoates were: methyl13-hydroxy-9(Z),11(E)-octadecadienoate (first), methyl13-hydroxy-9(E),11(E)-octadecadienoate, methyl9-hydroxy-10(E),12(Z)-octadecadienoate and methyl9-hydroxy-10(E),12(E)-octadecadienoate (last).

Biochemical analysis of protein extracts from developing tassels foractivity on the lipoxygenase substrate linoleic acid suggests that TS1is capable of lipid peroxidation. Protein extracts from wild-typetassels catalyzed hydroperoxidation of linoleic acid, whereas no suchactivity was detected in mutant ts1-ref/ts-1ref developing tassels(FIGS. 7A-7E). Mass spectrometry (MS) and high-performance liquidchromatography (HPLC) analyses showed that the products of thislipoxygenase activity are a mixture of 9-and 13-hydroperoxides in a50:50 ratio (FIG. 7A); primary structure analysis had suggested that TS1was a lipoxygenase with 13-regiospecificity. Therefore, it is possiblethat TS1 possesses dual 9- and 13-regiospecificity—which has notpreviously been described for a plastid-localized lipoxygenase—or thatTS1 function promotes the action of a separate 9-lipoxygenase.

Example 5 Quantification of Jasmonic Acid and Other Metabolites inTassel Inflorescences

Class 2 13-lipoxygenases participate in the biosynthesis of the planthormone jasmonic acid (JA) (Wasternack, 2007, Ann. Bot. 100:681) (FIG.8). The involvement of TS1 in JA biosynthesis was evaluated by measuringendogenous JA levels in developing wild-type and ts1-ref/ts1-ref mutanttassels.

As shown in FIG. 8, the first dedicated step in jasmonate biosynthesisis the peroxidation of α-linolenic acid (18:3) by 13-lipoxygenase toform (13S)-hydroperoxyoctadecatrienoic acid (13-HPOT). This is theputative function of TS1. 13-HPOT is transformed into the specificstereoisomer cis-(+)-12-oxophytodienoic acid (OPDA) through thesequential action of allene oxide synthase [yielding(13S)-12,13-epoxy-octadecatrienoic acid (12,13-EOT)] and allene oxidecyclase. These steps in JA biosynthesis occur in plant plastids, wherethe corresponding enzymes are localized. Subsequent reactions occur inthe peroxisomes. First, the cyclopentenone ring of OPDA is reduced to12-oxophytoenoic acid (OPC-8) by OPDA reductase. Next, three13-oxidation cycles are proposed to shorten the carboxylic side chain ofOPC-8 to produce the 12-carbon JA. A β-oxidation cycle is a set of fourenzymatic reactions: oxidation, hydration, oxidation, and thiolysis. Notall enzymes acting on β-oxidation during JA biosynthesis have beenidentified. Because the oxidation in the third step is normallyperformed by a dehydrogenase activity, it is possible that TS2 mayparticipate in this step of JA biosynthesis.

Maize plants of W22, ts1-ref/ts1-ref and ts1-ref/− were field-grownduring the summer of 2007. Developing tassel inflorescences between 0.8and 3 cm in length were quickly dissected, placed in 1.5 mlmicrocentrifuge tubes and rapidly frozen in liquid nitrogen. Tissuesamples were stored at −80° C. prior to solvent extraction. Jasmonicacid quantification was performed with vapor phase extraction for samplepreparation and chemical ionization gas chromatography/mass spectrometry(CI-GC/MS) as described (Schmelz et al., 2004, Plant J. 39:790).Descriptive and comparative statistics were obtained with Analyse-it®Standard edition (Analyse-it Software, Ltd, Leeds, England), an add-infor Microsoft Excel.

The average concentration of JA in wild-type and ts1-ref/+ heterozygoteswas 44.2 T 13.9 ng per gram of fresh weight (ng/g FW) and 40.3 T 20.2ng/g FW, respectively (FIG. 7B). Homozygous ts1-ref/ts1-ref tasselsshowed an average JA concentration of 4.3 T 2.1 ng/g FW (FIG. 7B),significantly below that of the wild type in a Kruskal-Wallis test andpairwise comparisons with a Bonferroni correction (P<0.0001). The ts1mutation thus appears to reduce JA levels by a factor of ˜10, indicatinga role for the hormone in the pistil cell death process. JA levels ofwild-type and mutant ts1 tassels are similar to those of wounded andnonwounded maize seedlings, respectively (Engelberth et al., 2007, Mol.Plant Microbe Interact. 20:707), which supports the notion that JA isactively synthesized during normal tassel development.

Example 6 Chemical Treatment of Maize Plants

Maize plants were grown under greenhouse conditions. Two seeds wereplanted in 2-gallon reusable pots containing Super-Fine Germinating Mix(Fafard, Agawam, Mass., USA) or Redi-earth Professional Growing Mix (SunGro, Bellevue, Wash., USA). Fertilization was performed with controlledrelease Osmocote Plus 15-9-12 (Scotts, Marysville, Ohio, USA) followingthe manufacturer recommendations. Additional watering was performed with4% ammonium iron citrate (Sigma-Aldrich) every 2 weeks to preventchlorosis. Greenhouse average temperatures were 28° C. (day) and 21° C.(night). Supplemental lightning was provided to achieve a 16:8 hourphotoperiod yearlong.

Tassels of about 1 cm were considered to be at an ideal stage toinitiate chemical treatments. Since a thick leaf whorl covers the maizetassel at this time of development, only a destructive dissection of theplant permits to assess with certainty the stage of tassel development(Bonnet, 1940, J. Agricult. Res. 60:25; Bonnet, 1948, Ann. Mo. Bot.Gard. 35:269). Additionally, the sex determination phase was reachedwithin a wide time window, between 28 and 46 days post-planting,depending on the growing conditions. Leaf number, node number orinternode distance were not always reliable criteria to predict thetassel developmental stage.

Seedlings from a family segregating 1:1 for wild-type (ts1-ref/Ts1) andts1 mutant (ts1-ref/ts1-rej) plants were genotyped for the Ts1 andts1-ref alleles with a PCR-based assay. Forty-six days after planting,one tsl and one heterozygote plant showing 6-8 fully expanded leaveswere dissected and their tassels were shown to be approximately 1.0 cmin height. This was used as a rough estimate indicating that similarplants, as judged by height and leaf number, were at the right stage toreceive chemical treatments. Jasmonic acid (JA, Sigma-Aldrich) wasdissolved at a concentration of 200 mM in absolute ethanol and stored at−20° C. Prior to plant treatment, the JA stock solution was diluted to aconcentration of 1 mM in deionized water. Control plants were treatedwith a 0.005% ethanol solution (“blank” treatment or negative control).One ml of the corresponding solution was applied into the apical leafcavity of each plant. Treatments were performed three times at 48-hourintervals.

The developmental timing of the pistil abortion process occurs in tasselinflorescences when they are 1.0 to 3.0 cm in length (Irish & Nelson,1993, Am. J. Bot. 80:292), which was also the stage at which ts1expression occurred in the subtending glumes (FIGS. 6B to 6D). A 0.005%ethanol solution, with or without 1 mM JA, was applied to tassels of ˜1cm in wildtype (ts1-ref/+) or ts1 mutant (ts1-ref/ts1-rej) siblingplants. In ts1 mutant plants, JA application reversed feminization, asevidenced by the presence of staminate spikelets mostly in the mid- toapical regions (FIG. 7D). Wildtype rescue in ts1 mutants was observed inthe appearance of subtending floral bracts (glumes) about 3 to 4 weeksafter treatment. JA-treated glumes in ts1 mutants were elongated, werecovered with numerous trichomes, and had a ring of anthocyanin depositedat the base (FIG. 7D), all three characteristics of wild-type staminatespikelets. Later in floral development, stamens emerged from JA-treatedts1 mutant spikelets (FIG. 9B).

Staminate florets from rescued JA-treated ts1/ts1 plants produced viablepollen, which was used for both self-pollination and test crosses tountreated ts1/ts1 mutant sibs. All test cross progeny (n>100) werehomozygous for the ts1-ref allele and displayed a complete ts1 mutantphenotype. The JA-rescued phenotype of the tassel inflorescence wasincomplete in that some spikelets were bisexual (FIG. 9A), containingboth pistils and stamens, and others (mainly those located at the baseof the inflorescence) were pistillate. These effects, however, may havebeen due to the timing of JA treatments, because the stage of floralmaturation differs in a positionally dependent fashion throughout theinflorescence. Rescued staminate spikelets were never observed inblank-treated ts1-ref/ts1-ref plants (FIG. 7C; FIG. 9D, and Table 4),nor did JA treatment affect heterozygous ts1-ref/+ sibs (Table 4). Thesimilar phenotype of ts1 and ts2 mutations indicates that both genes mayact in the same metabolic pathway. Therefore, JA was also applied tomutant ts2-ref/ts2-ref and ts2-ref/+ plants, which responded in the samemanner as the JA-treated ts1 mutants (FIG. 7E; FIG. 9C; and Table 4).These results indicate that JA can restore the wild-type phenotype inboth ts1 and ts2 mutant plants. Moreover, TS2 may have an unexpectedrole in JA biosynthesis, perhaps as one of the yet-unidentified enzymescatalyzing a series of β-oxidations in this metabolic pathway (FIGS.4A-4C).

Genes regulating meristem determinacy early in maize inflorescencedevelopment are expressed at the boundary of the meristem and theinflorescence axis rather than within the meristem itself. These genes,such as ramosa1, ramosa3, and barren stalk1 (Gallovatti et al, 2004,Nature 432:630; Satoh-Nagasawa et al., 2006, Nature 441:227; Vollbrechtet al., 2005, Nature 441:227), probably act non-cell-autonomously byproducing a diffusible signal at the base of the meristem (Vollbrecht etal., 2005, Nature 441:227). Analogously, ts1 expression at the boundaryof developing spikelet initials and inflorescence axis produce thehormone JA, which may diffuse within the spikelet to regulate sexualdevelopment. This situation parallels JA-mediated anther dehiscence inArabidopsis, where JA biosynthetic genes are highly expressed in theanther filament where it signals development both in the filament andwithin the anther (Ishiguro et al., 2001, Plant Cell 13:2191; Sanders etal., 2000, Plant Cell 12:1041). The expression of ts2 is known to bereduced in ts1 mutants (Calderon-Urrea & Dellaporta, 1993, Development126:435). The finding that ts2 may be involved in the same biosyntheticpathway as ts1 is not necessarily at odds with previous observation, asmost genes encoding enzymes of the JA biosynthetic pathway aretranscriptionally up-regulated by JA in a characteristic positivefeedback loop (Wasternack, 2007, Ann. Bot. 100:681).

JA signals plant responses to biotic and abiotic stresses (Wasternack,2007, Ann. Bot. 100:68) and regulates plant developmental processes suchas root growth (Staswicknet al., 1992, PNAS U.S.A. 89:6837) andmechanotransduction (Weiler et al., 1993, Phytochemistry 32:591). InArabidopsis, JA is required for male fertility because pollen maturationand anther dehiscence are blocked in mutations that impair JAbiosynthesis (Ishiguro etal., 2001, Plant Cell 13:2191; Sanders et al.,2000, Plant Cell 12:1041). JA may promote anther dehiscence by signalingdegeneration of the stomium, a group of specialized cells that run alongthe length of the anther and are necessary for dehiscence (Sanders etal., 1999, Sex, Plant Reprod. 11:297). The present results imply a rolefor JA in maize sex determination, wherein JA is necessary for signalingthe tasselseed-mediated pistil abortion and the acquisition of the malecharacteristics of staminate spikelets. The diverse mechanisms ofhormonal control in plant sex determination support the notion that thesystems have evolved independently multiple times (Ainswortyh et al.,1998, Curr. Top. Dev. Biol. 38:167).

The disclosures of each and every patent, patent application, andpublication cited herein are hereby incorporated herein by reference intheir entirety.

While the invention has been disclosed with reference to specificembodiments, it is apparent that other embodiments and variations ofthis invention may be devised by others skilled in the art withoutdeparting from the true spirit and scope of the invention. The appendedclaims are intended to be construed to include all such embodiments andequivalent variations.

1-25. (canceled)
 26. A method of suppressing complete feminization in aplant with a floral sexuality mutation, the method comprisingadministering to the plant an agriculturally compatible compositioncomprising an effective amount of a jasmonic acid compound selected fromthe group consisting of a jasmonic acid ester, jasmonic acid, or a saltthereof, wherein administration of the jasmonic acid compound to theplant suppresses complete feminization of the plant.
 27. The method ofclaim 26, wherein the plant is selected from the group consisting ofrice, sorghum, switchgrass, oats, wheat, barley, millet, rye, triticale,buckwheat, fonio, quinoa, teff, wild rice, amaranth, kaniwa, spelt,einkorn, emmer and durum.
 28. The method of claim 27, wherein the plantis grass-related.
 29. The method of claim 28, wherein the plant is rice.30. The method of claim 28, wherein the plant is sorghum.
 31. The methodof claim 26, wherein the floral sexuality mutation comprises atasselseed 1 (ts1) or tasselseed 2 (ts2) mutation.
 32. The method ofclaim 26, wherein the plant has a tassel ranging from about 0.8 cm toabout 3 cm in length at the time of administration.
 33. The method ofclaim 32, wherein the plant has a tassel of about 1 cm in length at thetime of administration.
 34. The method of claim 26, wherein malesexuality is restored in the plant.
 35. The method of claim 26, whereinthe jasmonic acid compound is jasmonic acid methyl ester.
 36. A methodof generating stock of a plant that is homozygous for a floral sexualitymutation, the method comprising the steps of: administering to a firstplant that is homozygous for the floral sexuality mutation anagriculturally compatible composition comprising an effective amount ofa jasmonic acid compound selected from the group consisting of ajasmonic acid ester, jasmonic acid, or a salt thereof, therebygenerating a treated plant, wherein complete feminization of the plantis suppressed, and breeding the treated plant with an untreated secondplant that is homozygous for the same mutation as the treated plant,wherein the progeny of the first treated plant and second plant ishomozygous for the floral sexuality mutation.
 37. The method of claim36, wherein the plant is selected from the group consisting of rice,sorghum, switchgrass, oats, wheat, barley, millet, rye, triticale,buckwheat, fonio, quinoa, teff, wild rice, amaranth, kaniwa, spelt,einkorn, emmer and durum.
 38. The method of claim 37, wherein the plantis grass-related.
 39. The method of claim 38, wherein the plant is rice.40. The method of claim 38, wherein the plant is sorghum.
 41. The methodof claim 36, wherein the floral sexuality mutation comprises atasselseed 1 (ts1) or tasselseed 2 (ts2) mutation.
 42. The method ofclaim 36, wherein the first plant has a tassel ranging from about 0.8 cmto about 3 cm in length at the time of administration.
 43. The method ofclaim 42, wherein the first plant has a tassel of about 1 cm in lengthat the time of administration.
 44. The method of claim 36, wherein thejasmonic acid compound is jasmonic acid methyl ester.
 45. A method ofsuppressing complete feminization in a maize plant with a tasselseed 1(ts1) or tasselseed 2 (ts2) mutation, the method comprisingadministering to the maize plant with a ts1 or ts2 mutation anagriculturally compatible composition comprising an effective amount ofa jasmonic acid ester or salt thereof, wherein administration of thejasmonic acid ester or salt thereof to the maize plant suppressescomplete feminization of the plant.
 46. The method of claim 45, whereinmale sexuality is restored in the maize plant.
 47. The method of claim45, wherein the maize plant has a tassel ranging from about 0.8 cm toabout 3 cm in length at the time of administration.
 48. The method ofclaim 47, wherein the maize plant has a tassel of about 1 cm in lengthat the time of administration.
 49. The method of claim 45, wherein thejasmonic acid ester is jasmonic acid methyl ester.
 50. A method ofgenerating stock of a maize plant that is homozygous for a ts1 or ts2mutation, the method comprising the steps of: administering to a firstmaize plant that is homozygous for the tsl or ts2 mutation anagriculturally compatible composition comprising an effective amount ofa jasmonic acid ester or salt thereof, thereby generating a treatedmaize plant, wherein complete feminization of the maize plant issuppressed, and breeding the treated maize plant with an untreatedsecond maize plant that is homozygous for the mutation, therebyobtaining progeny maize plants that are homozygous for the mutation. 51.The method of claim 50, wherein the first maize plant has a tasselranging from about 0.8 cm to about 3 cm in length at the time ofadministration,
 52. The method of claim 51, wherein the first maizeplant has a tassel of about 1 cm in length at the time ofadministration.
 53. The method of claim 50, wherein the jasmonic acidester is jasmonic acid methyl ester.